Just updating, this morning I went to work. Coolant temperature went up really fast, reached 96°C, dropped down to 87°, went up to 96°, down to 87° .... this for all the 40 km I did.
So looks like the thermostat is working perfectly now.
Now I need to check if the fan is turning on as it should be.
... and find out the intake air leak
Replying to the questions:
1) Does your engine diagnostic lamp light up?
2) Does the cooling fan run at high speed?
yes and yes
I had both. Don't kill me but, because I had the fan always on, I connected a relay with a small remote control
The thermostat I changed by myself last weekend, what for hell job

! The old one was also causing the temperature rise really slow, probably stuck open.
I did 2 flushing before replace the old thermostat and another one after the new thermostat was mounted only after I put the real coolant

Every time I was able to fill only 4 liters instead of the 6.2 that should be. Little bit confused about this. I turned on the heater and the AC every time during the flushing and allays open the valve on the thermostat housing and on the pipe that goes to the heater matrix.